10 homologs were found in PanDaTox collection
for query gene Smed_2391 on replicon NC_009636
Organism: Sinorhizobium medicae WSM419



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009636  Smed_2391  peptidase A1 pepsin  100 
 
 
368 aa  752    Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.116822 
 
 
-
 
NC_009654  Mmwyl1_1642  hypothetical protein  29.03 
 
 
406 aa  121  1.9999999999999998e-26  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.99117 
 
 
-
 
NC_006685  CNC04480  endopeptidase, putative  25.99 
 
 
418 aa  63.9  0.000000004  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  0.977771  n/a   
 
 
-
 
BN001306  ANIA_02903  vacuolar aspartyl protease (proteinase A) (Eurofung)  29.25 
 
 
394 aa  62.4  0.00000001  Aspergillus nidulans FGSC A4  Eukaryota  normal  normal  0.219219 
 
 
-
 
BN001303  ANIA_04422  aspartic-type endopeptidase (CtsD), putative (AFU_orthologue; AFUA_4G07040)  25.85 
 
 
498 aa  56.6  0.0000007  Aspergillus nidulans FGSC A4  Eukaryota  hitchhiker  0.00226006  normal  0.975942 
 
 
-
 
NC_006691  CNF01040  endopeptidase, putative  26.8 
 
 
471 aa  54.7  0.000003  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  n/a   
 
 
-
 
NC_006670  CNA05650  endopeptidase, putative  27.73 
 
 
438 aa  52  0.00002  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  n/a   
 
 
-
 
NC_009046  PICST_73446  aspartic proteinase precursor  27.13 
 
 
417 aa  49.7  0.00008  Scheffersomyces stipitis CBS 6054  Eukaryota  normal  normal 
 
 
-
 
NC_009365  OSTLU_44385  predicted protein  25.88 
 
 
454 aa  49.3  0.0001  Ostreococcus lucimarinus CCE9901  Eukaryota  normal  normal  0.21688 
 
 
-
 
NC_006691  CNF01000  endopeptidase, putative  25.58 
 
 
491 aa  47  0.0005  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  n/a   
 
 
-
 
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