9 homologs were found in PanDaTox collection
for query gene Smed_1278 on replicon NC_009636
Organism: Sinorhizobium medicae WSM419



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009636  Smed_1278  hypothetical protein  100 
 
 
604 aa  1214    Sinorhizobium medicae WSM419  Bacteria  normal  0.240881  normal 
 
 
-
 
NC_012848  Rleg_4754  hypothetical protein  51.11 
 
 
620 aa  559  1e-158  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  decreased coverage  0.00204432  normal  0.330996 
 
 
-
 
NC_011368  Rleg2_4659  hypothetical protein  50.09 
 
 
614 aa  556  1e-157  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.490573  normal  0.397384 
 
 
-
 
NC_009668  Oant_3059  hypothetical protein  50.8 
 
 
609 aa  549  1e-155  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_007802  Jann_3061  hypothetical protein  37.02 
 
 
597 aa  280  6e-74  Jannaschia sp. CCS1  Bacteria  hitchhiker  0.000704227  normal  0.301518 
 
 
-
 
NC_013526  Tter_2007  hypothetical protein  34.21 
 
 
643 aa  265  3e-69  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.857004  n/a   
 
 
-
 
NC_013730  Slin_6335  hypothetical protein  30.21 
 
 
499 aa  214  4.9999999999999996e-54  Spirosoma linguale DSM 74  Bacteria  normal  0.544382  normal 
 
 
-
 
NC_008541  Arth_0378  hypothetical protein  26.81 
 
 
653 aa  112  1.0000000000000001e-23  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_0545  hypothetical protein  37.61 
 
 
256 aa  105  2e-21  Delftia acidovorans SPH-1  Bacteria  normal  0.340338  normal 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>