14 homologs were found in PanDaTox collection
for query gene Slin_5456 on replicon NC_013730
Organism: Spirosoma linguale DSM 74



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013730  Slin_5456  transcriptional regulator/antitoxin, MazE  100 
 
 
85 aa  176  9e-44  Spirosoma linguale DSM 74  Bacteria  normal  0.52235  normal 
 
 
-
 
NC_013037  Dfer_1186  transcriptional regulator/antitoxin, MazE  45.56 
 
 
86 aa  79  0.00000000000002  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.669623 
 
 
-
 
NC_011729  PCC7424_1193  transcriptional regulator/antitoxin, MazE  45.35 
 
 
86 aa  73.9  0.0000000000007  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.291473 
 
 
-
 
NC_011146  Gbem_0025  transcriptional regulator/antitoxin, MazE  40 
 
 
84 aa  63.9  0.0000000006  Geobacter bemidjiensis Bem  Bacteria  normal  0.937668  n/a   
 
 
-
 
NC_011884  Cyan7425_3431  transcriptional regulator/antitoxin, MazE  41.86 
 
 
86 aa  63.5  0.0000000008  Cyanothece sp. PCC 7425  Bacteria  normal  0.314435  normal  0.150802 
 
 
-
 
NC_007517  Gmet_2502  transcriptional regulator/antitoxin, MazE  40.91 
 
 
84 aa  62.8  0.000000001  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.00910899  normal 
 
 
-
 
NC_009483  Gura_3379  transcriptional regulator/antitoxin, MazE  38.82 
 
 
84 aa  61.6  0.000000004  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_2471  transcriptional regulator/antitoxin, MazE  40 
 
 
81 aa  61.6  0.000000004  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_0353  transcriptional regulator/antitoxin, MazE  37.08 
 
 
89 aa  59.3  0.00000002  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_008609  Ppro_2436  transcriptional regulator/antitoxin, MazE  38.82 
 
 
81 aa  57.4  0.00000007  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_002967  TDE2246  hypothetical protein  34.12 
 
 
80 aa  54.7  0.0000004  Treponema denticola ATCC 35405  Bacteria  normal  0.518169  n/a   
 
 
-
 
NC_010553  BamMC406_6741  transcriptional regulator/antitoxin, MazE  41.03 
 
 
75 aa  53.1  0.000001  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_008346  Swol_1877  transcriptional regulator/antitoxin, MazE  43.06 
 
 
83 aa  52  0.000003  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_01481  suppressor of inhibitory function of ChpB  32.39 
 
 
85 aa  45.4  0.0003  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>