4 homologs were found in PanDaTox collection
for query gene Sked_02550 on replicon NC_013521
Organism: Sanguibacter keddieii DSM 10542



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013521  Sked_02550  Helix-turn-helix protein  100 
 
 
161 aa  315  1e-85  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_3630  helix-turn-helix domain-containing protein  57.14 
 
 
172 aa  183  8e-46  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.863106 
 
 
-
 
NC_008699  Noca_3331  helix-turn-helix domain-containing protein  60.25 
 
 
166 aa  182  2.0000000000000003e-45  Nocardioides sp. JS614  Bacteria  normal  0.687296  n/a   
 
 
-
 
NC_009783  VIBHAR_01120  hypothetical protein  32.69 
 
 
84 aa  40.4  0.01  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>