19 homologs were found in PanDaTox collection
for query gene Shew_2485 on replicon NC_009092
Organism: Shewanella loihica PV-4



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009092  Shew_2485  primosomal replication protein N'', putative  100 
 
 		 220 aa  452  1.0000000000000001e-126  Shewanella loihica PV-4  Bacteria  normal  1  normal  0.0159891 
 
 
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NC_009831  Ssed_1564  primosomal replication protein N'', putative  78.18 
 
 		 222 aa  357  8e-98  Shewanella sediminis HAW-EB3  Bacteria  normal  0.857042  hitchhiker  0.0000269133 
 
 
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NC_010506  Swoo_3088  primosomal replication protein N'', putative  75 
 
 		 224 aa  341  4e-93  Shewanella woodyi ATCC 51908  Bacteria  normal  0.647764  hitchhiker  0.0000204768 
 
 
-
 
NC_009901  Spea_2658  primosomal replication protein N'', putative  70.45 
 
 		 220 aa  297  9e-80  Shewanella pealeana ATCC 700345  Bacteria  normal  1  n/a   
 
 
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NC_011663  Sbal223_2727  primosomal replication protein N'', putative  64.09 
 
 		 220 aa  289  2e-77  Shewanella baltica OS223  Bacteria  normal  0.794988  hitchhiker  0.000571866 
 
 
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NC_009997  Sbal195_1650  primosomal replication protein N'', putative  64.09 
 
 		 220 aa  289  2e-77  Shewanella baltica OS195  Bacteria  normal  1  normal  0.43387 
 
 
-
 
NC_009665  Shew185_1616  primosomal replication protein N'', putative  64.09 
 
 		 220 aa  289  2e-77  Shewanella baltica OS185  Bacteria  normal  0.249114  n/a   
 
 
-
 
NC_009052  Sbal_1627  primosomal replication protein N'', putative  64.09 
 
 		 220 aa  289  2e-77  Shewanella baltica OS155  Bacteria  normal  1  n/a   
 
 
-
 
NC_004347  SO_1817  primosomal replication protein n'', putative  63.18 
 
 		 222 aa  287  1e-76  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
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NC_008700  Sama_1247  primosomal replication protein N'', putative  64.73 
 
 		 220 aa  286  2e-76  Shewanella amazonensis SB2B  Bacteria  normal  1  hitchhiker  0.000103965 
 
 
-
 
NC_008322  Shewmr7_2540  primosomal replication protein N'', putative  62.73 
 
 		 222 aa  284  7e-76  Shewanella sp. MR-7  Bacteria  normal  1  hitchhiker  0.00171474 
 
 
-
 
NC_008321  Shewmr4_2472  primosomal replication protein N'', putative  62.73 
 
 		 222 aa  283  1.0000000000000001e-75  Shewanella sp. MR-4  Bacteria  normal  1  hitchhiker  0.00169187 
 
 
-
 
NC_009438  Sputcn32_1511  primosomal replication protein N'', putative  63.18 
 
 		 220 aa  282  3.0000000000000004e-75  Shewanella putrefaciens CN-32  Bacteria  normal  1  n/a   
 
 
-
 
NC_008577  Shewana3_2632  primosomal replication protein N'', putative  62.73 
 
 		 222 aa  275  4e-73  Shewanella sp. ANA-3  Bacteria  normal  0.945  hitchhiker  0.00346674 
 
 
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NC_007954  Sden_2431  primosomal replication protein N'', putative  57.99 
 
 		 220 aa  261  6e-69  Shewanella denitrificans OS217  Bacteria  normal  1  n/a   
 
 
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NC_008345  Sfri_2632  primosomal replication protein N'', putative  56.54 
 
 		 220 aa  241  6e-63  Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
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NC_003910  CPS_3758  putative primosomal replication protein N''  26.13 
 
 		 227 aa  59.3  0.00000004  Colwellia psychrerythraea 34H  Bacteria  normal  1  n/a   
 
 
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NC_009457  VC0395_A1448  primosomal replication protein N``  26.14 
 
 		 187 aa  46.6  0.0003  Vibrio cholerae O395  Bacteria  hitchhiker  0.0000000000618679  n/a   
 
 
-
 
NC_009832  Spro_1132  primosomal replication priB and priC  27.36 
 
 		 178 aa  44.3  0.002  Serratia proteamaculans 568  Bacteria  normal  1  unclonable  0.0000000181094 
 
 
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