9 homologs were found in PanDaTox collection
for query gene SeD_A1589 on replicon NC_011205
Organism: Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011080  SNSL254_A1866  hypothetical protein  100 
 
 
45 aa  91.7  3e-18  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.569415  normal 
 
 
-
 
NC_011083  SeHA_C1929  hypothetical protein  100 
 
 
57 aa  91.7  3e-18  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  hitchhiker  0.00690874 
 
 
-
 
NC_011094  SeSA_A1872  hypothetical protein  100 
 
 
45 aa  91.7  3e-18  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_011149  SeAg_B1407  hypothetical protein  100 
 
 
45 aa  91.7  3e-18  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.158462  n/a   
 
 
-
 
NC_011205  SeD_A1589  hypothetical protein  100 
 
 
45 aa  91.7  3e-18  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal  0.892041 
 
 
-
 
NC_010468  EcolC_2378  hypothetical protein  82.22 
 
 
57 aa  79  0.00000000000002  Escherichia coli ATCC 8739  Bacteria  normal  0.363199  hitchhiker  0.0000012139 
 
 
-
 
NC_011353  ECH74115_1736  hypothetical protein  82.22 
 
 
50 aa  78.2  0.00000000000003  Escherichia coli O157:H7 str. EC4115  Bacteria  hitchhiker  0.00453347  normal  0.0284485 
 
 
-
 
NC_009436  Ent638_2294  hypothetical protein  71.11 
 
 
57 aa  67.4  0.00000000006  Enterobacter sp. 638  Bacteria  normal  0.877334  normal  0.722126 
 
 
-
 
NC_009708  YpsIP31758_1952  hypothetical protein  52.38 
 
 
46 aa  43.9  0.0007  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>