8 homologs were found in PanDaTox collection
for query gene Sden_2074 on replicon NC_007954
Organism: Shewanella denitrificans OS217



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007954  Sden_2074  hypothetical protein  100 
 
 
119 aa  237  4e-62  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_2249  hypothetical protein  51.64 
 
 
120 aa  111  3e-24  Shewanella frigidimarina NCIMB 400  Bacteria  hitchhiker  0.00000121885  n/a   
 
 
-
 
NC_009901  Spea_1913  hypothetical protein  47.9 
 
 
114 aa  91.7  3e-18  Shewanella pealeana ATCC 700345  Bacteria  normal  0.289976  n/a   
 
 
-
 
NC_009831  Ssed_1891  hypothetical protein  47.93 
 
 
119 aa  89.7  1e-17  Shewanella sediminis HAW-EB3  Bacteria  normal  0.256165  hitchhiker  0.0000107012 
 
 
-
 
NC_008700  Sama_2051  hypothetical protein  40.14 
 
 
134 aa  86.3  1e-16  Shewanella amazonensis SB2B  Bacteria  decreased coverage  0.00000455814  normal  0.370284 
 
 
-
 
NC_009092  Shew_1571  hypothetical protein  47.11 
 
 
119 aa  85.9  2e-16  Shewanella loihica PV-4  Bacteria  hitchhiker  0.00000300078  normal 
 
 
-
 
NC_010506  Swoo_2694  hypothetical protein  46.22 
 
 
116 aa  84.3  6e-16  Shewanella woodyi ATCC 51908  Bacteria  hitchhiker  0.000000115206  normal  0.110124 
 
 
-
 
NC_011138  MADE_01898  hypothetical protein  34.75 
 
 
104 aa  61.2  0.000000005  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.0266674  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>