8 homologs were found in PanDaTox collection
for query gene Saro_0780 on replicon NC_007794
Organism: Novosphingobium aromaticivorans DSM 12444



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007794  Saro_0780  xylose isomerase-like TIM barrel  100 
 
 
302 aa  629  1e-179  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.227962  n/a   
 
 
-
 
NC_007794  Saro_0785  xylose isomerase-like TIM barrel  64.97 
 
 
305 aa  417  9.999999999999999e-116  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.369266  n/a   
 
 
-
 
NC_007794  Saro_0710  xylose isomerase-like TIM barrel  29.34 
 
 
343 aa  115  1.0000000000000001e-24  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_009427  Saro_3571  hypothetical protein  26.41 
 
 
348 aa  114  2.0000000000000002e-24  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_3528  hypothetical protein  29.5 
 
 
346 aa  112  6e-24  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.04131 
 
 
-
 
NC_009427  Saro_3576  hypothetical protein  21.45 
 
 
331 aa  70.5  0.00000000004  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_0422  xylose isomerase domain-containing protein  23.57 
 
 
333 aa  64.3  0.000000002  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_008698  Tpen_1349  xylose isomerase domain-containing protein  23.55 
 
 
280 aa  47.4  0.0003  Thermofilum pendens Hrk 5  Archaea  normal  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>