8 homologs were found in PanDaTox collection
for query gene Sama_2110 on replicon NC_008700
Organism: Shewanella amazonensis SB2B



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008700  Sama_2110  hypothetical protein  100 
 
 
72 aa  140  7e-33  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_1624  hypothetical protein  69.57 
 
 
67 aa  62.4  0.000000002  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_1699  hypothetical protein  69.57 
 
 
72 aa  62.4  0.000000002  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_1700  hypothetical protein  54.41 
 
 
72 aa  61.2  0.000000004  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_007954  Sden_2373  hypothetical protein  53.97 
 
 
68 aa  52  0.000003  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_1592  hypothetical protein  50 
 
 
65 aa  49.3  0.00002  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_1493  hypothetical protein  47.83 
 
 
89 aa  41.2  0.005  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_1559  hypothetical protein  53.33 
 
 
77 aa  41.2  0.005  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
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