10 homologs were found in PanDaTox collection
for query gene SO_A0152 on replicon NC_004349
Organism: Shewanella oneidensis MR-1



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_004349  SO_A0152  hypothetical protein  100 
 
 
59 aa  114  3e-25  Shewanella oneidensis MR-1  Bacteria  normal  0.199805  n/a   
 
 
-
 
NC_004349  SO_A0069  hypothetical protein  67.16 
 
 
111 aa  77.8  0.00000000000004  Shewanella oneidensis MR-1  Bacteria  normal  0.138923  n/a   
 
 
-
 
NC_009438  Sputcn32_0181  hypothetical protein  62.69 
 
 
111 aa  72  0.000000000002  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_1992  hypothetical protein  62.69 
 
 
111 aa  72.4  0.000000000002  Shewanella baltica OS195  Bacteria  normal  normal  0.951791 
 
 
-
 
NC_008740  Maqu_1913  hypothetical protein  72.73 
 
 
112 aa  50.4  0.000008  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_0174  transposase IS3/IS911 family protein  80 
 
 
94 aa  42.4  0.003  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_1466  transposase IS3/IS911 family protein  80 
 
 
94 aa  42.4  0.003  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_1963  transposase IS3/IS911 family protein  80 
 
 
94 aa  42.4  0.003  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_3923  transposase IS3/IS911 family protein  80 
 
 
94 aa  42.4  0.003  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008573  Shewana3_4159  putative transposase  70 
 
 
56 aa  40.8  0.006  Shewanella sp. ANA-3  Bacteria  normal  normal  0.137992 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>