7 homologs were found in PanDaTox collection
for query gene SO_1710 on replicon NC_004347
Organism: Shewanella oneidensis MR-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_004347  SO_1710  hypothetical protein  100 
 
 
115 aa  241  3e-63  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009438  Sputcn32_1424  hypothetical protein  87.83 
 
 
157 aa  219  9.999999999999999e-57  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_2569  hypothetical protein  79.79 
 
 
140 aa  164  4e-40  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_2636  hypothetical protein  79.79 
 
 
140 aa  164  4e-40  Shewanella sp. MR-7  Bacteria  hitchhiker  0.000410954  normal 
 
 
-
 
NC_013517  Sterm_3471  hypothetical protein  67.57 
 
 
157 aa  156  7e-38  Sebaldella termitidis ATCC 33386  Bacteria  hitchhiker  0.000404125  n/a   
 
 
-
 
NC_008577  Shewana3_2744  hypothetical protein  84.48 
 
 
106 aa  112  1.0000000000000001e-24  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.0000545405  normal 
 
 
-
 
NC_013421  Pecwa_2709  hypothetical protein  33.33 
 
 
129 aa  47.8  0.00005  Pectobacterium wasabiae WPP163  Bacteria  decreased coverage  0.0018864  n/a   
 
 
-
 
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