5 homologs were found in PanDaTox collection
for query gene SNSL254_B0004 on replicon NC_011079
Organism: Salmonella enterica subsp. enterica serovar Newport str. SL254



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011079  SNSL254_B0004    100 
 
 
441 bp  874    Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.474079  n/a   
 
 
-
 
NC_010672  SbBS512_C0014  hypothetical protein  92.96 
 
 
372 bp  202  6e-50  Shigella boydii CDC 3083-94  Bacteria  normal  0.00000445339  n/a   
 
 
-
 
NC_010158  YpAngola_0005    91.04 
 
 
560 bp  163  5e-38  Yersinia pestis Angola  Bacteria  normal  0.154899  hitchhiker  0.00173522 
 
 
-
 
NC_010158  YpAngola_0019    91.04 
 
 
560 bp  163  5e-38  Yersinia pestis Angola  Bacteria  normal  0.500712  normal 
 
 
-
 
NC_010485  EcSMS35_B0006  hypothetical protein  91.04 
 
 
372 bp  163  5e-38  Escherichia coli SMS-3-5  Bacteria  normal  n/a   
 
 
-
 
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