10 homologs were found in PanDaTox collection
for query gene Rru_A2968 on replicon NC_007643
Organism: Rhodospirillum rubrum ATCC 11170



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007643  Rru_A2968  hypothetical protein  100 
 
 
185 aa  366  1e-100  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.0652235  n/a   
 
 
-
 
NC_009719  Plav_0289  hypothetical protein  44.09 
 
 
200 aa  155  2e-37  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.614307 
 
 
-
 
NC_010338  Caul_4059  hypothetical protein  40.11 
 
 
188 aa  129  3e-29  Caulobacter sp. K31  Bacteria  normal  0.0131824  normal  0.906786 
 
 
-
 
NC_008347  Mmar10_0615  hypothetical protein  41.4 
 
 
198 aa  94.7  6e-19  Maricaulis maris MCS10  Bacteria  normal  normal  0.0752686 
 
 
-
 
NC_011365  Gdia_1409  hypothetical protein  37.97 
 
 
172 aa  90.5  1e-17  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal 
 
 
-
 
NC_009484  Acry_0631  hypothetical protein  35.9 
 
 
189 aa  77.4  0.0000000000001  Acidiphilium cryptum JF-5  Bacteria  normal  0.104076  n/a   
 
 
-
 
NC_008048  Sala_2355  hypothetical protein  36.03 
 
 
139 aa  53.5  0.000002  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal  0.0389794 
 
 
-
 
NC_009511  Swit_3782  hypothetical protein  41.67 
 
 
143 aa  53.1  0.000002  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.219041 
 
 
-
 
NC_007794  Saro_3257  hypothetical protein  37.84 
 
 
138 aa  50.4  0.00001  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.822646  n/a   
 
 
-
 
NC_008686  Pden_2716  hypothetical protein  33.11 
 
 
190 aa  47.8  0.00008  Paracoccus denitrificans PD1222  Bacteria  normal  normal  0.963209 
 
 
-
 
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