13 homologs were found in PanDaTox collection
for query gene Rpic_4288 on replicon NC_010678
Organism: Ralstonia pickettii 12J



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010678  Rpic_4288  transport-associated  100 
 
 		 138 aa  273  4e-73  Ralstonia pickettii 12J  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012857  Rpic12D_4398  transport-associated  100 
 
 		 138 aa  273  4e-73  Ralstonia pickettii 12D  Bacteria  normal  1  normal  1 
 
 
-
 
NC_003296  RS02375  lipoprotein transmembrane  73.64 
 
 		 125 aa  160  5.0000000000000005e-39  Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  0.0473948 
 
 
-
 
NC_011146  Gbem_1671  transport-associated  39.24 
 
 		 105 aa  53.5  0.0000009  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_012918  GM21_2542  transport-associated protein  37.97 
 
 		 105 aa  52  0.000003  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.000000000000702242 
 
 
-
 
NC_007643  Rru_A1501  transport-associated protein  36.17 
 
 		 104 aa  46.6  0.0001  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  1  n/a   
 
 
-
 
NC_009483  Gura_2407  transport-associated protein  30.21 
 
 		 104 aa  43.9  0.0007  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.00333473  n/a   
 
 
-
 
NC_007947  Mfla_0010  transport-associated  39.06 
 
 		 101 aa  42.7  0.002  Methylobacillus flagellatus KT  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012912  Dd1591_3785  hypothetical protein  36.56 
 
 		 191 aa  42.7  0.002  Dickeya zeae Ech1591  Bacteria  hitchhiker  0.00453791  n/a   
 
 
-
 
NC_013173  Dbac_2170  transport-associated  34.57 
 
 		 104 aa  42.7  0.002  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.395466  n/a   
 
 
-
 
NC_009708  YpsIP31758_1939  phospholipid-binding domain-containing protein  33.33 
 
 		 104 aa  40.4  0.008  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.315443  n/a   
 
 
-
 
NC_010159  YpAngola_A2319  phospholipid-binding domain-containing protein  33.33 
 
 		 104 aa  40.4  0.008  Yersinia pestis Angola  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010465  YPK_2048  transport-associated  33.33 
 
 		 104 aa  40.4  0.008  Yersinia pseudotuberculosis YPIII  Bacteria  normal  1  n/a   
 
 
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