10 homologs were found in PanDaTox collection
for query gene Rpic12D_5374 on replicon NC_012849
Organism: Ralstonia pickettii 12D



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_012849  Rpic12D_5374  hypothetical protein  100 
 
 		 137 aa  277  3e-74  Ralstonia pickettii 12D  Bacteria  normal  1  normal  0.305321 
 
 
-
 
NC_010682  Rpic_1483  hypothetical protein  84.67 
 
 		 137 aa  239  1e-62  Ralstonia pickettii 12J  Bacteria  normal  1  hitchhiker  0.000000149401 
 
 
-
 
NC_007971  Rmet_5976  heavy metal resistance protein CzcE  55.81 
 
 		 133 aa  103  1e-21  Cupriavidus metallidurans CH34  Bacteria  hitchhiker  0.00188762  normal  0.0685611 
 
 
-
 
NC_010682  Rpic_1758  hypothetical protein  55.81 
 
 		 131 aa  103  1e-21  Ralstonia pickettii 12J  Bacteria  normal  0.614248  normal  0.375673 
 
 
-
 
NC_007971  Rmet_6122  CopH involved in Cu(II)/Cu(I) resistance (czcE-like protein) up with Mn  33.56 
 
 		 153 aa  76.6  0.00000000000009  Cupriavidus metallidurans CH34  Bacteria  normal  0.298561  normal  1 
 
 
-
 
NC_010682  Rpic_1812  hypothetical protein  39.78 
 
 		 169 aa  66.6  0.0000000001  Ralstonia pickettii 12J  Bacteria  normal  0.24557  normal  0.422277 
 
 
-
 
NC_007974  Rmet_5656  heavy metal resistance protein CzcE  40.51 
 
 		 158 aa  65.9  0.0000000002  Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  0.0744242 
 
 
-
 
NC_010682  Rpic_1834  hypothetical protein  33.71 
 
 		 129 aa  62.4  0.000000002  Ralstonia pickettii 12J  Bacteria  normal  0.919217  hitchhiker  0.00159861 
 
 
-
 
NC_011662  Tmz1t_3968  hypothetical protein  33.66 
 
 		 131 aa  52.8  0.000002  Thauera sp. MZ1T  Bacteria  normal  0.70591  n/a   
 
 
-
 
NC_007298  Daro_2283  hypothetical protein  27.97 
 
 		 129 aa  47.4  0.00007  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  1 
 
 
-
 
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