6 homologs were found in PanDaTox collection
for query gene Rpic12D_4675 on replicon NC_012855
Organism: Ralstonia pickettii 12D



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012855  Rpic12D_4675  hypothetical protein  100 
 
 
84 aa  168  2e-41  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010678  Rpic_4580  hypothetical protein  33.33 
 
 
129 aa  46.2  0.0002  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_012857  Rpic12D_3506  hypothetical protein  33.33 
 
 
129 aa  46.2  0.0002  Ralstonia pickettii 12D  Bacteria  normal  0.226474  normal 
 
 
-
 
NC_008060  Bcen_2891  hypothetical protein  35.9 
 
 
179 aa  44.3  0.0005  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_0215  hypothetical protein  35.9 
 
 
179 aa  44.3  0.0005  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_3869  hypothetical protein  43.33 
 
 
190 aa  42  0.003  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
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