8 homologs were found in PanDaTox collection
for query gene Rpic12D_2817 on replicon NC_012856
Organism: Ralstonia pickettii 12D



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012856  Rpic12D_2817  hypothetical protein  100 
 
 
68 aa  137  3.9999999999999997e-32  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_1666  hypothetical protein  89.71 
 
 
68 aa  125  1.0000000000000001e-28  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_2950  hypothetical protein  89.71 
 
 
68 aa  125  1.0000000000000001e-28  Ralstonia pickettii 12J  Bacteria  normal  0.658738  normal 
 
 
-
 
NC_010682  Rpic_1589  hypothetical protein  88.24 
 
 
68 aa  122  1e-27  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_010683  Rpic_4991  hypothetical protein  82.35 
 
 
68 aa  115  1.9999999999999998e-25  Ralstonia pickettii 12J  Bacteria  hitchhiker  0.000114824  normal  0.0124436 
 
 
-
 
NC_012856  Rpic12D_2535  hypothetical protein  86.76 
 
 
67 aa  113  8.999999999999998e-25  Ralstonia pickettii 12D  Bacteria  normal  normal  0.622 
 
 
-
 
NC_010682  Rpic_3165  hypothetical protein  77.94 
 
 
68 aa  107  4.0000000000000004e-23  Ralstonia pickettii 12J  Bacteria  normal  hitchhiker  0.0000000202525 
 
 
-
 
NC_003296  RS02001  hypothetical protein  51.47 
 
 
84 aa  65.1  0.0000000003  Ralstonia solanacearum GMI1000  Bacteria  normal  0.911268  normal 
 
 
-
 
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