9 homologs were found in PanDaTox collection
for query gene Rpic12D_2129 on replicon NC_012856
Organism: Ralstonia pickettii 12D



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_012856  Rpic12D_2129  hypothetical protein  100 
 
 		 214 aa  426  1e-118  Ralstonia pickettii 12D  Bacteria  normal  0.115115  normal  1 
 
 
-
 
NC_003296  RS02319  hypothetical protein  77.1 
 
 		 214 aa  319  1.9999999999999998e-86  Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  0.11877 
 
 
-
 
NC_007974  Rmet_4326  transmembrane protein  40 
 
 		 191 aa  101  9e-21  Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007948  Bpro_1263  hypothetical protein  37.33 
 
 		 205 aa  79.3  0.00000000000004  Polaromonas sp. JS666  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007614  Nmul_A2664  hypothetical protein  36.13 
 
 		 207 aa  72.8  0.000000000003  Nitrosospira multiformis ATCC 25196  Bacteria  unclonable  0.0000000468896  n/a   
 
 
-
 
NC_007908  Rfer_4123  hypothetical protein  35.76 
 
 		 210 aa  70.1  0.00000000002  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_007964  Nham_2709  hypothetical protein  33.75 
 
 		 198 aa  65.9  0.0000000005  Nitrobacter hamburgensis X14  Bacteria  normal  1  n/a   
 
 
-
 
NC_013889  TK90_0189  putative transmembrane protein  29.83 
 
 		 205 aa  58.2  0.00000009  Thioalkalivibrio sp. K90mix  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007484  Noc_2968  putative transmembrane protein  26.55 
 
 		 206 aa  52.4  0.000005  Nitrosococcus oceani ATCC 19707  Bacteria  hitchhiker  0.000309157  n/a   
 
 
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