9 homologs were found in PanDaTox collection
for query gene Rpal_1137 on replicon NC_011004
Organism: Rhodopseudomonas palustris TIE-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011004  Rpal_1137  hypothetical protein  100 
 
 
265 aa  528  1e-149  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B5555  hypothetical protein  35.1 
 
 
273 aa  135  6.0000000000000005e-31  Ralstonia eutropha JMP134  Bacteria  hitchhiker  0.00390538  n/a   
 
 
-
 
NC_011666  Msil_1288  hypothetical protein  31.78 
 
 
256 aa  118  7.999999999999999e-26  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_011901  Tgr7_1782  hypothetical protein  33.49 
 
 
273 aa  110  3e-23  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_007974  Rmet_5941  hypothetical protein  34.8 
 
 
225 aa  108  1e-22  Cupriavidus metallidurans CH34  Bacteria  hitchhiker  0.0000000292122  normal 
 
 
-
 
NC_010001  Cphy_0983  hypothetical protein  26.98 
 
 
248 aa  83.2  0.000000000000004  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_008261  CPF_0796  hypothetical protein  25 
 
 
246 aa  76.6  0.0000000000004  Clostridium perfringens ATCC 13124  Bacteria  decreased coverage  0.0000584679  n/a   
 
 
-
 
NC_008262  CPR_0785  hypothetical protein  25.52 
 
 
246 aa  72.4  0.000000000007  Clostridium perfringens SM101  Bacteria  normal  0.907673  n/a   
 
 
-
 
NC_009338  Mflv_5201  hypothetical protein  40 
 
 
117 aa  58.2  0.0000001  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
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