9 homologs were found in PanDaTox collection
for query gene Rmet_6247 on replicon NC_007972
Organism: Cupriavidus metallidurans CH34



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007972  Rmet_6247  hypothetical protein  100 
 
 
149 aa  299  8.000000000000001e-81  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_1570  hypothetical protein  52.54 
 
 
144 aa  124  3e-28  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_012849  Rpic12D_5234  hypothetical protein  52.54 
 
 
144 aa  124  3e-28  Ralstonia pickettii 12D  Bacteria  normal  0.322495  normal  0.45658 
 
 
-
 
NC_010553  BamMC406_6514  hypothetical protein  34.87 
 
 
154 aa  78.2  0.00000000000003  Burkholderia ambifaria MC40-6  Bacteria  normal  0.586089  normal 
 
 
-
 
NC_008254  Meso_3816  hypothetical protein  40.87 
 
 
215 aa  72  0.000000000002  Chelativorans sp. BNC1  Bacteria  normal  0.175283  n/a   
 
 
-
 
NC_010087  Bmul_5601  hypothetical protein  35.54 
 
 
155 aa  68.9  0.00000000002  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_011892  Mnod_8294  hypothetical protein  35.65 
 
 
235 aa  56.2  0.0000002  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.227886  n/a   
 
 
-
 
NC_011758  Mchl_5559  hypothetical protein  30.43 
 
 
259 aa  54.3  0.0000006  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.569692  normal  0.0677937 
 
 
-
 
NC_008607  Ppro_3813  hypothetical protein  31.86 
 
 
172 aa  52.8  0.000002  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
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