9 homologs were found in PanDaTox collection
for query gene Rmet_6198 on replicon NC_007972
Organism: Cupriavidus metallidurans CH34



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007972  Rmet_6198  hypothetical protein  100 
 
 
119 aa  246  7e-65  Cupriavidus metallidurans CH34  Bacteria  normal  hitchhiker  0.00203887 
 
 
-
 
NC_011887  Mnod_7992  hypothetical protein  36.36 
 
 
122 aa  77  0.00000000000008  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.279455  n/a   
 
 
-
 
NC_011894  Mnod_2236  hypothetical protein  36.36 
 
 
122 aa  77  0.00000000000008  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_2500  hypothetical protein  38.89 
 
 
134 aa  71.6  0.000000000004  Polaromonas sp. JS666  Bacteria  normal  normal  0.0971358 
 
 
-
 
NC_010511  M446_6161  hypothetical protein  34 
 
 
122 aa  69.3  0.00000000002  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_1893  hypothetical protein  34.51 
 
 
130 aa  68.6  0.00000000003  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_4738  hypothetical protein  40 
 
 
130 aa  68.2  0.00000000003  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.358058  normal 
 
 
-
 
NC_010581  Bind_2527  hypothetical protein  33.96 
 
 
139 aa  67.4  0.00000000007  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal  0.504656 
 
 
-
 
NC_007953  Bxe_C1203  hypothetical protein  32.61 
 
 
129 aa  58.2  0.00000004  Burkholderia xenovorans LB400  Bacteria  normal  0.0134969  normal 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>