8 homologs were found in PanDaTox collection
for query gene RSc3216 on replicon NC_003295
Organism: Ralstonia solanacearum GMI1000



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_003295  RSc3216  hypothetical protein  100 
 
 
555 aa  1129    Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.0179556 
 
 
-
 
NC_010625  Bphy_7013  hypothetical protein  36.86 
 
 
411 aa  215  9.999999999999999e-55  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_010070  Bmul_6208  hypothetical protein  41.63 
 
 
254 aa  172  2e-41  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.971144  normal 
 
 
-
 
NC_010070  Bmul_6205  hypothetical protein  72.48 
 
 
110 aa  167  6.9999999999999995e-40  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_008390  Bamb_1187  hypothetical protein  30.54 
 
 
200 aa  97.4  6e-19  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_007950  Bpro_5483  hypothetical protein  37.96 
 
 
210 aa  69.3  0.0000000002  Polaromonas sp. JS666  Bacteria  normal  normal  0.193372 
 
 
-
 
NC_013889  TK90_0262  hypothetical protein  26.15 
 
 
355 aa  47  0.001  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.440726 
 
 
-
 
NC_007901  Rfer_4380  hypothetical protein  44.68 
 
 
380 aa  44.3  0.006  Rhodoferax ferrireducens T118  Bacteria  n/a    n/a   
 
 
-
 
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