10 homologs were found in PanDaTox collection
for query gene RSP_6239 on replicon NC_007494
Organism: Rhodobacter sphaeroides 2.4.1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007494  RSP_6239  hypothetical protein  100 
 
 
59 aa  120  6e-27  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.818794  n/a   
 
 
-
 
NC_009050  Rsph17029_3518  hypothetical protein  100 
 
 
59 aa  120  6e-27  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.689366  normal 
 
 
-
 
NC_009429  Rsph17025_3806  hypothetical protein  89.66 
 
 
59 aa  108  3e-23  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.0967757  normal 
 
 
-
 
NC_009952  Dshi_1471  hypothetical protein  61.4 
 
 
61 aa  82.8  0.000000000000002  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.036877  normal  0.0476077 
 
 
-
 
NC_008044  TM1040_1207  hypothetical protein  60.71 
 
 
60 aa  77.4  0.00000000000007  Ruegeria sp. TM1040  Bacteria  normal  0.298507  normal 
 
 
-
 
NC_008687  Pden_4505  hypothetical protein  58.62 
 
 
59 aa  77  0.00000000000008  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_0098  hypothetical protein  59.32 
 
 
61 aa  74.3  0.0000000000005  Caulobacter sp. K31  Bacteria  normal  0.97718  normal  0.124135 
 
 
-
 
NC_007802  Jann_2437  hypothetical protein  54.24 
 
 
67 aa  73.2  0.000000000001  Jannaschia sp. CCS1  Bacteria  normal  hitchhiker  0.00488906 
 
 
-
 
NC_011365  Gdia_0123  hypothetical protein  55.56 
 
 
61 aa  68.6  0.00000000003  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.598329  normal  0.0549641 
 
 
-
 
NC_007643  Rru_A0519  hypothetical protein  56.52 
 
 
62 aa  54.7  0.0000004  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.553794  n/a   
 
 
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