5 homologs were found in PanDaTox collection
for query gene RS03084 on replicon NC_003296
Organism: Ralstonia solanacearum GMI1000



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_003296  RS03084  hypothetical protein  100 
 
 
228 aa  456  1e-127  Ralstonia solanacearum GMI1000  Bacteria  normal  0.656628  normal  0.58496 
 
 
-
 
NC_003296  RS02158  hypothetical protein  40.78 
 
 
248 aa  57.8  0.0000001  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.417137 
 
 
-
 
NC_010717  PXO_04172  hypothetical protein  27.94 
 
 
288 aa  45.4  0.0007  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.946418  n/a   
 
 
-
 
NC_009831  Ssed_0371  hypothetical protein  33.78 
 
 
608 aa  43.5  0.003  Shewanella sediminis HAW-EB3  Bacteria  hitchhiker  0.00495548  unclonable  0.000000000101633 
 
 
-
 
NC_011883  Ddes_1853  hypothetical protein  37.31 
 
 
281 aa  42.4  0.006  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>