7 homologs were found in PanDaTox collection
for query gene RPC_2516 on replicon NC_007925
Organism: Rhodopseudomonas palustris BisB18



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007925  RPC_2516  hypothetical protein  100 
 
 
99 aa  193  5.000000000000001e-49  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.0599595  normal  0.451546 
 
 
-
 
NC_011758  Mchl_5533  hypothetical protein  63.22 
 
 
85 aa  85.5  2e-16  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.0496717 
 
 
-
 
NC_009719  Plav_3046  hypothetical protein  41.76 
 
 
90 aa  69.3  0.00000000002  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.562434  normal 
 
 
-
 
NC_008786  Veis_4393  hypothetical protein  38.37 
 
 
95 aa  52.4  0.000002  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_4392  hypothetical protein  37.21 
 
 
95 aa  51.2  0.000004  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_4530  hypothetical protein  40 
 
 
168 aa  43.9  0.0007  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.529986 
 
 
-
 
NC_008309  HS_1741  hypothetical protein  36.78 
 
 
101 aa  43.1  0.001  Haemophilus somnus 129PT  Bacteria  normal  n/a   
 
 
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