11 homologs were found in PanDaTox collection
for query gene RPC_1910 on replicon NC_007925
Organism: Rhodopseudomonas palustris BisB18



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007925  RPC_1910  methanol dehydrogenase, beta subunit  100 
 
 		 98 aa  202  2e-51  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.681659  normal  1 
 
 
-
 
NC_010725  Mpop_4629  methanol dehydrogenase beta subunit  69.57 
 
 		 96 aa  134  4e-31  Methylobacterium populi BJ001  Bacteria  normal  0.407541  normal  1 
 
 
-
 
NC_010172  Mext_4147  methanol dehydrogenase beta subunit  71.59 
 
 		 96 aa  132  1.9999999999999998e-30  Methylobacterium extorquens PA1  Bacteria  normal  0.129069  normal  0.348207 
 
 
-
 
NC_011757  Mchl_4515  methanol dehydrogenase beta subunit  71.59 
 
 		 96 aa  132  1.9999999999999998e-30  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.0343837  normal  1 
 
 
-
 
NC_011666  Msil_0474  methanol dehydrogenase beta subunit  65.91 
 
 		 101 aa  124  6e-28  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_011887  Mnod_8037  methanol dehydrogenase beta subunit  69.23 
 
 		 99 aa  122  2e-27  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_002977  MCA0782  methanol dehydrogenase, small subunit  73.33 
 
 		 94 aa  121  3e-27  Methylococcus capsulatus str. Bath  Bacteria  normal  0.381581  n/a   
 
 
-
 
NC_010505  Mrad2831_4207  methanol dehydrogenase beta subunit  62.07 
 
 		 96 aa  119  9.999999999999999e-27  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.135721  normal  0.122701 
 
 
-
 
NC_007947  Mfla_2041  methanol dehydrogenase, beta subunit  61.25 
 
 		 91 aa  110  4.0000000000000004e-24  Methylobacillus flagellatus KT  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008687  Pden_2996  methanol dehydrogenase, beta subunit  68.92 
 
 		 103 aa  111  4.0000000000000004e-24  Paracoccus denitrificans PD1222  Bacteria  decreased coverage  0.0052543  normal  1 
 
 
-
 
NC_008786  Veis_1826  methanol dehydrogenase, beta subunit  59.09 
 
 		 91 aa  109  1.0000000000000001e-23  Verminephrobacter eiseniae EF01-2  Bacteria  normal  1  normal  0.865158 
 
 
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