8 homologs were found in PanDaTox collection
for query gene RPB_2347 on replicon NC_007778
Organism: Rhodopseudomonas palustris HaA2



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007778  RPB_2347  hypothetical protein  100 
 
 
92 aa  176  1e-43  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.628099  normal  0.622912 
 
 
-
 
NC_007958  RPD_3118  hypothetical protein  88.04 
 
 
92 aa  126  8.000000000000001e-29  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.0439737  normal  0.84746 
 
 
-
 
NC_011004  Rpal_3610  hypothetical protein  78.95 
 
 
95 aa  118  1.9999999999999998e-26  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_3392  hypothetical protein  68.92 
 
 
92 aa  81.6  0.000000000000003  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.162641  normal  0.419529 
 
 
-
 
NC_007406  Nwi_1746  hypothetical protein  56.92 
 
 
87 aa  64.3  0.0000000005  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.233365  normal  0.383874 
 
 
-
 
NC_010505  Mrad2831_1419  hypothetical protein  57.78 
 
 
88 aa  47.4  0.00007  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  hitchhiker  0.0000101446 
 
 
-
 
NC_009485  BBta_6132  hypothetical protein  43.1 
 
 
87 aa  46.2  0.0001  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0777982 
 
 
-
 
NC_007964  Nham_2181  hypothetical protein  55.56 
 
 
98 aa  42.4  0.002  Nitrobacter hamburgensis X14  Bacteria  normal  0.0670137  n/a   
 
 
-
 
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