6 homologs were found in PanDaTox collection
for query gene RPB_2175 on replicon NC_007778
Organism: Rhodopseudomonas palustris HaA2



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007778  RPB_2175  hypothetical protein  100 
 
 
81 aa  157  4e-38  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0992173  normal  0.0177562 
 
 
-
 
NC_007958  RPD_3258  hypothetical protein  91.36 
 
 
81 aa  140  5e-33  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.0255941 
 
 
-
 
NC_009485  BBta_7551  hypothetical protein  52.63 
 
 
79 aa  55.8  0.0000002  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.272725  normal 
 
 
-
 
NC_007964  Nham_2751  hypothetical protein  45.83 
 
 
94 aa  47  0.00009  Nitrobacter hamburgensis X14  Bacteria  normal  0.174246  n/a   
 
 
-
 
NC_007406  Nwi_2376  hypothetical protein  51.92 
 
 
123 aa  45.8  0.0002  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.73908  normal 
 
 
-
 
NC_011004  Rpal_3879  hypothetical protein  48.94 
 
 
82 aa  42  0.003  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
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