6 homologs were found in PanDaTox collection
for query gene Pmen_1190 on replicon NC_009439
Organism: Pseudomonas mendocina ymp



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009439  Pmen_1190  hypothetical protein  100 
 
 
81 aa  160  6e-39  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_007347  Reut_A0394  hypothetical protein  51.85 
 
 
82 aa  72.8  0.000000000001  Ralstonia eutropha JMP134  Bacteria  normal  0.415175  n/a   
 
 
-
 
NC_007948  Bpro_3403  hypothetical protein  49.32 
 
 
78 aa  64.3  0.0000000006  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A0095  hypothetical protein  55.17 
 
 
78 aa  61.2  0.000000005  Methylibium petroleiphilum PM1  Bacteria  normal  0.037694  normal  0.756521 
 
 
-
 
NC_008254  Meso_3463  putative signal peptide protein  46.84 
 
 
80 aa  52.8  0.000001  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_2056  putative signal peptide protein  44.16 
 
 
79 aa  51.2  0.000005  Sinorhizobium medicae WSM419  Bacteria  normal  0.608951  normal  0.0959421 
 
 
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