10 homologs were found in PanDaTox collection
for query gene Ping_1413 on replicon NC_008709
Organism: Psychromonas ingrahamii 37



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008709  Ping_1413  hypothetical protein  100 
 
 
65 aa  134  4e-31  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_009457  VC0395_A1310  hypothetical protein  54.69 
 
 
67 aa  76.6  0.0000000000001  Vibrio cholerae O395  Bacteria  hitchhiker  0.000315615  n/a   
 
 
-
 
NC_013456  VEA_003069  hypothetical protein  50.79 
 
 
66 aa  73.9  0.0000000000006  Vibrio sp. Ex25  Bacteria  decreased coverage  0.000000140328  n/a   
 
 
-
 
NC_011312  VSAL_I0859  hypothetical protein  53.23 
 
 
64 aa  71.2  0.000000000004  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_02774  hypothetical protein  47.62 
 
 
66 aa  70.5  0.000000000008  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009092  Shew_2284  hypothetical protein  33.9 
 
 
73 aa  47.4  0.00007  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_1633  hypothetical protein  33.33 
 
 
64 aa  43.5  0.0009  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_2144  hypothetical protein  34.92 
 
 
62 aa  42.7  0.001  Shewanella amazonensis SB2B  Bacteria  normal  0.267297  normal 
 
 
-
 
NC_009831  Ssed_1659  hypothetical protein  32.81 
 
 
66 aa  43.1  0.001  Shewanella sediminis HAW-EB3  Bacteria  normal  0.154866  normal 
 
 
-
 
NC_009457  VC0395_A0397  hypothetical protein  33.33 
 
 
63 aa  40.4  0.008  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
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