5 homologs were found in PanDaTox collection
for query gene Pfl01_3479 on replicon NC_007492
Organism: Pseudomonas fluorescens Pf0-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007492  Pfl01_3479  hypothetical protein  100 
 
 
111 aa  228  2e-59  Pseudomonas fluorescens Pf0-1  Bacteria  hitchhiker  0.000156822  decreased coverage  0.0075095 
 
 
-
 
NC_007492  Pfl01_3477  hypothetical protein  50.56 
 
 
93 aa  95.1  3e-19  Pseudomonas fluorescens Pf0-1  Bacteria  hitchhiker  0.00843437  decreased coverage  0.00668912 
 
 
-
 
NC_013517  Sterm_1196  hypothetical protein  31.82 
 
 
124 aa  56.6  0.0000001  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_1585  hypothetical protein  28.45 
 
 
128 aa  43.5  0.0009  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.0026302 
 
 
-
 
NC_009953  Sare_2004  hypothetical protein  28.44 
 
 
135 aa  40.8  0.006  Salinispora arenicola CNS-205  Bacteria  normal  decreased coverage  0.00035972 
 
 
-
 
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