5 homologs were found in PanDaTox collection
for query gene PSPTO_2879 on replicon NC_004578
Organism: Pseudomonas syringae pv. tomato str. DC3000



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_004578  PSPTO_2879  lipoprotein, putative  100 
 
 
166 aa  330  7.000000000000001e-90  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.370694  n/a   
 
 
-
 
NC_007005  Psyr_2624  putative lipoprotein  89.16 
 
 
166 aa  296  1e-79  Pseudomonas syringae pv. syringae B728a  Bacteria  hitchhiker  0.00295332  normal 
 
 
-
 
NC_013421  Pecwa_0462  hypothetical protein  37.11 
 
 
160 aa  101  4e-21  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012560  Avin_51990  lipoprotein  33.95 
 
 
165 aa  98.2  5e-20  Azotobacter vinelandii DJ  Bacteria  normal  0.957002  n/a   
 
 
-
 
NC_009425  Ent638_4231  hypothetical protein  32.43 
 
 
160 aa  84.3  8e-16  Enterobacter sp. 638  Bacteria  normal  0.0728083  normal 
 
 
-
 
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