6 homologs were found in PanDaTox collection
for query gene PSPTO_2647 on replicon NC_004578
Organism: Pseudomonas syringae pv. tomato str. DC3000



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_004578  PSPTO_2647  hypothetical protein  100 
 
 
246 aa  503  1e-141  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  decreased coverage  0.00423714  n/a   
 
 
-
 
NC_007492  Pfl01_3031  hypothetical protein  73.62 
 
 
243 aa  358  6e-98  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.0643178  normal  0.791144 
 
 
-
 
NC_013421  Pecwa_1615  hypothetical protein  47.37 
 
 
238 aa  211  9e-54  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_008060  Bcen_2655  hypothetical protein  48.58 
 
 
241 aa  186  4e-46  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_0452  hypothetical protein  48.58 
 
 
241 aa  186  4e-46  Burkholderia cenocepacia HI2424  Bacteria  normal  0.600349  n/a   
 
 
-
 
NC_009456  VC0395_0856  hypothetical protein  39.47 
 
 
230 aa  167  1e-40  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
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