5 homologs were found in PanDaTox collection
for query gene PSPTO_2550 on replicon NC_004578
Organism: Pseudomonas syringae pv. tomato str. DC3000



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_004578  PSPTO_2550  hypothetical protein  100 
 
 
46 aa  99  2e-20  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0128081  n/a   
 
 
-
 
NC_008463  PA14_42960  hypothetical protein  47.37 
 
 
46 aa  43.9  0.0006  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.16072 
 
 
-
 
NC_009656  PSPA7_3608  hypothetical protein  47.37 
 
 
46 aa  43.9  0.0006  Pseudomonas aeruginosa PA7  Bacteria  normal  0.824512  n/a   
 
 
-
 
NC_004578  PSPTO_5423  hypothetical protein  43.24 
 
 
54 aa  43.1  0.001  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_5582  hypothetical protein  45.95 
 
 
54 aa  43.1  0.001  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.175723  normal 
 
 
-
 
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