7 homologs were found in PanDaTox collection
for query gene PP_3131 on replicon NC_002947
Organism: Pseudomonas putida KT2440



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_002947  PP_3131  hypothetical protein  100 
 
 
508 aa  999    Pseudomonas putida KT2440  Bacteria  normal  0.0830434  normal  0.680521 
 
 
-
 
NC_009512  Pput_2584  hypothetical protein  96.65 
 
 
508 aa  900    Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_2724  hypothetical protein  94.49 
 
 
508 aa  905    Pseudomonas putida GB-1  Bacteria  normal  0.484456  normal  0.659262 
 
 
-
 
NC_010501  PputW619_2914  hypothetical protein  76.57 
 
 
508 aa  751    Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_009511  Swit_2379  hypothetical protein  27.51 
 
 
501 aa  62.4  0.00000002  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_009620  Smed_4799  hypothetical protein  24.71 
 
 
514 aa  48.1  0.0004  Sinorhizobium medicae WSM419  Bacteria  normal  0.186071  normal 
 
 
-
 
NC_013131  Caci_8491  O-antigen polymerase  26.3 
 
 
469 aa  45.8  0.002  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.867737 
 
 
-
 
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