4 homologs were found in PanDaTox collection
for query gene PP_1960 on replicon NC_002947
Organism: Pseudomonas putida KT2440



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_002947  PP_1960  hypothetical protein  100 
 
 
440 aa  920    Pseudomonas putida KT2440  Bacteria  normal  hitchhiker  0.000276477 
 
 
-
 
NC_008228  Patl_2020  hypothetical protein  31.19 
 
 
417 aa  171  3e-41  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.941924  n/a   
 
 
-
 
NC_009656  PSPA7_0074  phage integrase family site specific recombinase  28.35 
 
 
288 aa  82  0.00000000000002  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_02632  aminopeptidase N  22.53 
 
 
890 aa  43.9  0.005  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
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