7 homologs were found in PanDaTox collection
for query gene PP_1921 on replicon NC_002947
Organism: Pseudomonas putida KT2440



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_002947  PP_1921  hypothetical protein  100 
 
 
387 aa  798    Pseudomonas putida KT2440  Bacteria  normal  0.198639  unclonable  0.000000422513 
 
 
-
 
NC_010552  BamMC406_3389  hypothetical protein  43.38 
 
 
1351 aa  97.1  4e-19  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_6474  hypothetical protein  32.61 
 
 
1040 aa  70.1  0.00000000006  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_009484  Acry_0802  hypothetical protein  31.22 
 
 
305 aa  69.3  0.0000000001  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_011991  Avi_9517  hypothetical protein  28.29 
 
 
1290 aa  62.4  0.00000001  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_007509  Bcep18194_C6598  hypothetical protein  28.95 
 
 
1058 aa  59.7  0.00000008  Burkholderia sp. 383  Bacteria  hitchhiker  0.000923882  normal 
 
 
-
 
NC_011992  Dtpsy_1173  hypothetical protein  28.81 
 
 
309 aa  51.6  0.00003  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>