8 homologs were found in PanDaTox collection
for query gene PICST_55783 on replicon NC_009042
Organism: Scheffersomyces stipitis CBS 6054



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009042  PICST_55783  protein farnesyltransferase / geranylgeranyltransferase type I alpha subunit  100 
 
 
311 aa  642    Scheffersomyces stipitis CBS 6054  Eukaryota  normal  normal  0.713206 
 
 
-
 
BN001302  ANIA_03867  hypothetical protein similar to TPA: CaaX farnesyltransferase alpha subunit (Broad)  37.69 
 
 
323 aa  198  1.0000000000000001e-49  Aspergillus nidulans FGSC A4  Eukaryota  normal  normal 
 
 
-
 
NC_006687  CNE03110  pheromone maturation-related protein, putative  29.32 
 
 
336 aa  147  2.0000000000000003e-34  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  n/a   
 
 
-
 
NC_011676  PHATRDRAFT_45841  predicted protein  24.77 
 
 
331 aa  101  1e-20  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  0.653699  n/a   
 
 
-
 
NC_009364  OSTLU_26200  predicted protein  33.11 
 
 
259 aa  78.2  0.0000000000002  Ostreococcus lucimarinus CCE9901  Eukaryota  normal  0.0637936  normal  0.758729 
 
 
-
 
NC_006683  CNN00970  RAB-protein geranylgeranyltransferase, putative  29.15 
 
 
330 aa  72.4  0.00000000001  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  n/a   
 
 
-
 
BN001307  ANIA_01981  geranylgeranyl transferae type II alpha subunit, putative (AFU_orthologue; AFUA_4G10580)  25.33 
 
 
359 aa  61.6  0.00000002  Aspergillus nidulans FGSC A4  Eukaryota  normal  hitchhiker  0.00264102 
 
 
-
 
NC_009374  OSTLU_43543  predicted protein  28.79 
 
 
271 aa  55.8  0.0000009  Ostreococcus lucimarinus CCE9901  Eukaryota  normal  normal 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>