8 homologs were found in PanDaTox collection
for query gene PC1_3177 on replicon NC_012917
Organism: Pectobacterium carotovorum subsp. carotovorum PC1



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_012917  PC1_3177  prophage Hp1 family holin  100 
 
 		 69 aa  144  5e-34  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.298475  n/a   
 
 
-
 
NC_009436  Ent638_3495  prophage Hp1 family holin  42.03 
 
 		 73 aa  70.5  0.000000000008  Enterobacter sp. 638  Bacteria  normal  1  normal  0.148775 
 
 
-
 
NC_011080  SNSL254_A4371  putative prophage Hp1 family holin  42.03 
 
 		 69 aa  65.5  0.0000000002  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.618809  hitchhiker  0.00000000806308 
 
 
-
 
NC_009832  Spro_0872  prophage Hp1 family holin  48.61 
 
 		 72 aa  64.7  0.0000000005  Serratia proteamaculans 568  Bacteria  normal  1  normal  0.0924837 
 
 
-
 
NC_009800  EcHS_A0930  holin family protein  39.13 
 
 		 71 aa  58.2  0.00000004  Escherichia coli HS  Bacteria  normal  1  n/a   
 
 
-
 
NC_011205  SeD_A3044  holin family protein  39.13 
 
 		 71 aa  58.2  0.00000004  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  1  hitchhiker  0.000765281 
 
 
-
 
NC_010468  EcolC_2771  putative secretory protein  37.68 
 
 		 71 aa  56.2  0.0000002  Escherichia coli ATCC 8739  Bacteria  normal  0.586872  decreased coverage  0.0000147683 
 
 
-
 
NC_011149  SeAg_B2862  holin family protein  40 
 
 		 71 aa  51.6  0.000004  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  1  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>