9 homologs were found in PanDaTox collection
for query gene PC1_3160 on replicon NC_012917
Organism: Pectobacterium carotovorum subsp. carotovorum PC1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012917  PC1_3160  hypothetical protein  100 
 
 
82 aa  168  2e-41  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_0984  hypothetical protein  59.26 
 
 
85 aa  61.6  0.000000004  Escherichia coli E24377A  Bacteria  normal  0.346046  n/a   
 
 
-
 
NC_010498  EcSMS35_4311  hypothetical protein  59.26 
 
 
74 aa  60.8  0.000000005  Escherichia coli SMS-3-5  Bacteria  normal  0.298623  hitchhiker  0.000134198 
 
 
-
 
NC_011080  SNSL254_A2944  hypothetical protein  55.36 
 
 
76 aa  57.8  0.00000005  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  decreased coverage  0.00403968  hitchhiker  2.8699699999999998e-27 
 
 
-
 
NC_011083  SeHA_C3500  hypothetical protein  52.73 
 
 
84 aa  53.1  0.000001  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.143039  hitchhiker  2.67724e-25 
 
 
-
 
NC_012880  Dd703_3841  hypothetical protein  44.64 
 
 
76 aa  47.8  0.00005  Dickeya dadantii Ech703  Bacteria  normal  0.297747  n/a   
 
 
-
 
NC_012917  PC1_2634  hypothetical protein  44.64 
 
 
79 aa  47.8  0.00006  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.0193484  n/a   
 
 
-
 
NC_011080  SNSL254_A4352  hypothetical protein  61.54 
 
 
74 aa  43.1  0.001  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.0946409  hitchhiker  0.000000000774326 
 
 
-
 
NC_011353  ECH74115_3062  hypothetical protein  59.26 
 
 
74 aa  43.1  0.001  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.024117  hitchhiker  0.000000000628218 
 
 
-
 
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