8 homologs were found in PanDaTox collection
for query gene PC1_1496 on replicon NC_012917
Organism: Pectobacterium carotovorum subsp. carotovorum PC1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012917  PC1_1496  hypothetical protein  100 
 
 
439 aa  910    Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_2969  hypothetical protein  80.18 
 
 
439 aa  746    Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_010622  Bphy_0250  hypothetical protein  47.38 
 
 
441 aa  444  1e-123  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_2544  hypothetical protein  45.82 
 
 
442 aa  400  9.999999999999999e-111  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_3156  hypothetical protein  43.91 
 
 
445 aa  354  1e-96  Delftia acidovorans SPH-1  Bacteria  hitchhiker  0.0000000294118  hitchhiker  0.00000000000017357 
 
 
-
 
NC_007973  Rmet_3347  hypothetical protein  30.75 
 
 
432 aa  202  8e-51  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_3288  hypothetical protein  22.51 
 
 
436 aa  75.9  0.000000000001  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0821  hypothetical protein  22.77 
 
 
613 aa  46.6  0.0008  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
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