10 homologs were found in PanDaTox collection
for query gene Nham_4481 on replicon NC_007960
Organism: Nitrobacter hamburgensis X14



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007960  Nham_4481  hypothetical protein  100 
 
 
135 aa  269  9e-72  Nitrobacter hamburgensis X14  Bacteria  normal  0.0382953  n/a   
 
 
-
 
NC_009475  BBta_p0277  hypothetical protein  78.7 
 
 
108 aa  162  1.0000000000000001e-39  Bradyrhizobium sp. BTAi1  Bacteria  n/a    normal 
 
 
-
 
NC_011984  Avi_9168  hypothetical protein  54.26 
 
 
231 aa  94.7  3e-19  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_009670  Oant_4754  hypothetical protein  50.54 
 
 
111 aa  86.3  1e-16  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_008254  Meso_3818  hypothetical protein  40.91 
 
 
274 aa  62.8  0.000000002  Chelativorans sp. BNC1  Bacteria  normal  0.339515  n/a   
 
 
-
 
NC_009717  Xaut_4980  hypothetical protein  61.4 
 
 
81 aa  61.2  0.000000004  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_007961  Nham_4662  hypothetical protein  38.04 
 
 
137 aa  53.9  0.0000007  Nitrobacter hamburgensis X14  Bacteria  normal  0.658506  n/a   
 
 
-
 
NC_008242  Meso_4320  hypothetical protein  38.71 
 
 
107 aa  51.6  0.000003  Chelativorans sp. BNC1  Bacteria  normal  0.481951  n/a   
 
 
-
 
NC_011982  Avi_8097  hypothetical protein  38.71 
 
 
134 aa  50.8  0.000006  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_011991  Avi_9555  hypothetical protein  37.89 
 
 
154 aa  50.8  0.000006  Agrobacterium vitis S4  Bacteria  normal  0.247955  n/a   
 
 
-
 
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