11 homologs were found in PanDaTox collection
for query gene Mpop_4430 on replicon NC_010725
Organism: Methylobacterium populi BJ001



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010725  Mpop_4430  hypothetical protein  100 
 
 
160 aa  317  3e-86  Methylobacterium populi BJ001  Bacteria  normal  normal  0.63316 
 
 
-
 
NC_010511  M446_1150  hypothetical protein  60.53 
 
 
240 aa  183  7e-46  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_012560  Avin_37320  hypothetical protein  38.24 
 
 
155 aa  69.7  0.00000000001  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_1411  hypothetical protein  38.13 
 
 
163 aa  68.2  0.00000000005  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_1581  hypothetical protein  34.53 
 
 
165 aa  62.4  0.000000002  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0754175  normal  0.248809 
 
 
-
 
NC_008576  Mmc1_2036  hypothetical protein  37.93 
 
 
144 aa  61.6  0.000000004  Magnetococcus sp. MC-1  Bacteria  normal  normal  0.345648 
 
 
-
 
NC_012918  GM21_1250  hypothetical protein  34.31 
 
 
147 aa  58.5  0.00000003  Geobacter sp. M21  Bacteria  n/a    normal  0.164225 
 
 
-
 
NC_009483  Gura_0948  hypothetical protein  31.16 
 
 
147 aa  57.8  0.00000006  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.0000163038  n/a   
 
 
-
 
NC_011146  Gbem_0416  hypothetical protein  31.07 
 
 
112 aa  57  0.0000001  Geobacter bemidjiensis Bem  Bacteria  normal  0.0133961  n/a   
 
 
-
 
NC_007643  Rru_A0712  XRE family transcriptional regulator  40.74 
 
 
197 aa  43.1  0.002  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_0184  hypothetical protein  40.62 
 
 
96 aa  43.1  0.002  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
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