23 homologs were found in PanDaTox collection
for query gene Mpop_0176 on replicon NC_010725
Organism: Methylobacterium populi BJ001



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010725  Mpop_0176  conserved hypothetical protein; putative signal peptide  100 
 
 
81 aa  160  6e-39  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_0519  conserved hypothetical protein; putative signal peptide  91.25 
 
 
81 aa  146  1.0000000000000001e-34  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.744458  normal 
 
 
-
 
NC_010505  Mrad2831_5239  putative signal peptide  83.75 
 
 
81 aa  135  2e-31  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.444951  normal 
 
 
-
 
NC_010172  Mext_1186  putative signal peptide  72.15 
 
 
81 aa  99.4  1e-20  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.0453854 
 
 
-
 
NC_011757  Mchl_1346  putative signal peptide  70.89 
 
 
81 aa  97.8  5e-20  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.523719 
 
 
-
 
NC_010511  M446_5739  putative signal peptide  55.7 
 
 
81 aa  77.4  0.00000000000006  Methylobacterium sp. 4-46  Bacteria  normal  hitchhiker  0.00330735 
 
 
-
 
NC_011666  Msil_1274  conserved hypothetical protein; putative signal peptide  53.62 
 
 
82 aa  75.1  0.0000000000003  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_011894  Mnod_6392  putative signal peptide  56.76 
 
 
91 aa  74.7  0.0000000000004  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011887  Mnod_8198  putative signal peptide  53.09 
 
 
93 aa  74.3  0.0000000000005  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_4469  hypothetical protein  59.15 
 
 
90 aa  69.7  0.00000000001  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_3988  hypothetical protein  56.34 
 
 
127 aa  67.4  0.00000000007  Methylobacterium extorquens PA1  Bacteria  normal  0.373992  normal  0.776088 
 
 
-
 
NC_011757  Mchl_4357  hypothetical protein  56.34 
 
 
90 aa  67  0.00000000008  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_3793  hypothetical protein  51.95 
 
 
95 aa  66.6  0.0000000001  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0724358  normal 
 
 
-
 
NC_010511  M446_5236  putative signal peptide  59.49 
 
 
86 aa  66.2  0.0000000002  Methylobacterium sp. 4-46  Bacteria  normal  0.705289  decreased coverage  0.00307291 
 
 
-
 
NC_010511  M446_1895  hypothetical protein  54.93 
 
 
82 aa  63.9  0.0000000007  Methylobacterium sp. 4-46  Bacteria  normal  0.825535  normal 
 
 
-
 
NC_011894  Mnod_2098  hypothetical protein  57.14 
 
 
86 aa  61.6  0.000000003  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_0029  putative signal peptide  55.7 
 
 
86 aa  61.6  0.000000004  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.180521  n/a   
 
 
-
 
NC_011894  Mnod_3069  hypothetical protein  55.71 
 
 
82 aa  58.9  0.00000002  Methylobacterium nodulans ORS 2060  Bacteria  hitchhiker  0.00310388  n/a   
 
 
-
 
NC_010505  Mrad2831_4078  hypothetical protein  50.7 
 
 
86 aa  57.8  0.00000005  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.768373 
 
 
-
 
NC_010511  M446_0026  putative signal peptide  55.56 
 
 
84 aa  56.6  0.0000001  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0237146 
 
 
-
 
NC_010511  M446_0303  hypothetical protein  55.71 
 
 
86 aa  48.5  0.00003  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.015487 
 
 
-
 
NC_011666  Msil_0881  hypothetical protein  40 
 
 
108 aa  44.3  0.0005  Methylocella silvestris BL2  Bacteria  n/a    normal  0.062724 
 
 
-
 
NC_010581  Bind_0067  hypothetical protein  34.44 
 
 
95 aa  41.6  0.004  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
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