8 homologs were found in PanDaTox collection
for query gene MmarC5_R0006 on replicon NC_009135
Organism: Methanococcus maripaludis C5



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009135  MmarC5_R0006  tRNA-OTHER  100 
 
 
74 bp  147  4.0000000000000006e-34  Methanococcus maripaludis C5  Archaea  normal  n/a   
 
 
-
 
NC_009637  MmarC7_R0008  tRNA-OTHER  100 
 
 
74 bp  147  4.0000000000000006e-34  Methanococcus maripaludis C7  Archaea  normal  0.747837  normal  0.260405 
 
 
-
 
NC_009975  MmarC6_R0043  tRNA-OTHER  100 
 
 
74 bp  147  4.0000000000000006e-34  Methanococcus maripaludis C6  Archaea  normal  0.229894  n/a   
 
 
-
 
NC_009634  Mevan_R0011  tRNA-OTHER  97.3 
 
 
74 bp  131  2.0000000000000002e-29  Methanococcus vannielii SB  Archaea  normal  n/a   
 
 
-
 
NC_009635  Maeo_R0018  tRNA-OTHER  94.92 
 
 
78 bp  85.7  0.000000000000001  Methanococcus aeolicus Nankai-3  Archaea  normal  n/a   
 
 
-
 
NC_013158  Huta_R0039  tRNA-Pro  100 
 
 
71 bp  54  0.000005  Halorhabdus utahensis DSM 12940  Archaea  normal  n/a   
 
 
-
 
NC_009051  Memar_R0038  tRNA-OTHER  96.3 
 
 
74 bp  46.1  0.001  Methanoculleus marisnigri JR1  Archaea  normal  n/a   
 
 
-
 
NC_013926  Aboo_R0036  tRNA-Pro  96.3 
 
 
76 bp  46.1  0.001  Aciduliprofundum boonei T469  Archaea  normal  0.591858  n/a   
 
 
-
 
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