6 homologs were found in PanDaTox collection
for query gene Mboo_R0009 on replicon NC_009712
Organism: Candidatus Methanoregula boonei 6A8



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009712  Mboo_R0009  tRNA-Ser  100 
 
 
84 bp  167  5e-40  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal 
 
 
-
 
NC_008942  Mlab_R0001  tRNA-Ser  89.29 
 
 
84 bp  95.6  2e-18  Methanocorpusculum labreanum Z  Archaea  normal  hitchhiker  0.00371061 
 
 
-
 
NC_011832  Mpal_R0069  tRNA-Ser  87.21 
 
 
86 bp  77.8  0.0000000000004  Methanosphaerula palustris E1-9c  Archaea  normal  0.980326  normal  0.628883 
 
 
-
 
NC_007355  Mbar_AR0003  tRNA-Ser  92.86 
 
 
83 bp  60  0.00000009  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.503711  normal 
 
 
-
 
NC_007955  Mbur_R0001  tRNA-Ser  92.86 
 
 
83 bp  60  0.00000009  Methanococcoides burtonii DSM 6242  Archaea  normal  0.108923  n/a   
 
 
-
 
NC_009051  Memar_R0011  tRNA-Ser  91.49 
 
 
87 bp  56  0.000001  Methanoculleus marisnigri JR1  Archaea  normal  0.0176232  n/a   
 
 
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