8 homologs were found in PanDaTox collection
for query gene Mbar_AR0065 on replicon NC_007355
Organism: Methanosarcina barkeri str. Fusaro



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007355  Mbar_AR0062  tRNA-Phe  100 
 
 
75 bp  149  1.0000000000000001e-34  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.0551583  normal 
 
 
-
 
NC_007355  Mbar_AR0065  tRNA-Phe  100 
 
 
75 bp  149  1.0000000000000001e-34  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.0541765  normal  0.747056 
 
 
-
 
NC_007955  Mbur_R0007  tRNA-Phe  100 
 
 
75 bp  149  1.0000000000000001e-34  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_013441  Gbro_R0036  tRNA-Val  96.3 
 
 
75 bp  46.1  0.001  Gordonia bronchialis DSM 43247  Bacteria  normal  0.0258762  n/a   
 
 
-
 
NC_013510  Tcur_R0038  tRNA-Val  96.3 
 
 
72 bp  46.1  0.001  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00268365  n/a   
 
 
-
 
NC_013510  Tcur_R0041  tRNA-Val  96.3 
 
 
72 bp  46.1  0.001  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.000505895  n/a   
 
 
-
 
NC_014158  Tpau_R0021  tRNA-Val  96.3 
 
 
75 bp  46.1  0.001  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013203  Apar_R0032  tRNA-Cys  100 
 
 
74 bp  44.1  0.004  Atopobium parvulum DSM 20469  Bacteria  normal  normal  0.492449 
 
 
-
 
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