6 homologs were found in PanDaTox collection
for query gene Lferr_0310 on replicon NC_011206
Organism: Acidithiobacillus ferrooxidans ATCC 53993



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011206  Lferr_0310  hypothetical protein  100 
 
 
182 aa  368  1e-101  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.757938  hitchhiker  0.0000731062 
 
 
-
 
NC_011761  AFE_0137  hypothetical protein  100 
 
 
447 aa  363  1e-99  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.0760948  n/a   
 
 
-
 
NC_011206  Lferr_1215  outer membrane porin  39.47 
 
 
442 aa  135  4e-31  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  hitchhiker  0.00000387662  hitchhiker  0.0000000148872 
 
 
-
 
NC_011761  AFE_1497  hypothetical protein  39.47 
 
 
442 aa  135  4e-31  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.291485  n/a   
 
 
-
 
NC_011206  Lferr_1660  outer membrane porin  33.15 
 
 
428 aa  76.6  0.0000000000002  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.133249  normal  0.448938 
 
 
-
 
NC_011761  AFE_1991  hypothetical protein  33.15 
 
 
428 aa  76.6  0.0000000000002  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.0954759  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>