6 homologs were found in PanDaTox collection
for query gene Lcho_2331 on replicon NC_010524
Organism: Leptothrix cholodnii SP-6



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010524  Lcho_2331  hypothetical protein  100 
 
 
86 aa  178  2e-44  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_008639  Cpha266_2199  hypothetical protein  44.59 
 
 
91 aa  80.1  0.00000000000001  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_3145  hypothetical protein  41.25 
 
 
86 aa  79.3  0.00000000000002  Thioalkalivibrio sp. HL-EbGR7  Bacteria  hitchhiker  0.00393258  n/a   
 
 
-
 
NC_009654  Mmwyl1_0056  hypothetical protein  41.27 
 
 
73 aa  63.2  0.000000001  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009998  Sbal195_4573  hypothetical protein  36 
 
 
86 aa  62.8  0.000000001  Shewanella baltica OS195  Bacteria  normal  0.0307111  normal 
 
 
-
 
NC_010803  Clim_1043  hypothetical protein  42.59 
 
 
60 aa  58.9  0.00000002  Chlorobium limicola DSM 245  Bacteria  normal  n/a   
 
 
-
 
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