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3 homologs were found in PanDaTox collection
for query gene
LGAS_r1021
on replicon NC_008530
Organism:
Lactobacillus gasseri ATCC 33323
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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score
E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008530
LGAS_r1021
RNA_RNaseP_classB
100
330 bp
654
Lactobacillus gasseri ATCC 33323
Bacteria
normal
1
normal
1
-
NC_008528
OEOE_r1091
RNA_RNaseP_classB
91.67
324 bp
60
0.0000004
Oenococcus oeni PSU-1
Bacteria
hitchhiker
0.00251739
n/a
-
NC_008531
LEUM_s0654
RNA_RNaseP_classB
89.36
334 bp
48.1
0.002
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293
Bacteria
unclonable
0.000000906374
n/a
-
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